Publications

A light way for nuclear cell biologists
G. Forlani and B. Di Ventura
The Journal of Biochemistry
doi:10.1093/jb/mvaa139


Engineering AraC to make it responsive to light instead of arabinose E. Romano, A. Baumschlager, E. B. Akmeriç, N. Palanisamy, M. Houmani, G. Schmidt, M. A. Öztürk, L. Ernst, M. Khammash and B. Di Ventura bioRxiv
doi:10.1101/2020.07.14.202911


Optogenetic Control of Nucleocytoplasmic Protein Transport
D. Weis and B. Di Ventura
Dominik Niopek (ed.), Photoswitching Proteins: Methods and Protocols, Methods in Molecular Biology, vol. 2173 2020


C-terminal eYFP fusion impairs Escherichia coli MinE function
N. Palanisamy, M. A. Öztürk, E. B. Akmeric and B. Di Ventura
Open Biology 2020
doi:10.1098/rsob.200010


Split intein-mediated selection of cells containing two plasmids using a single antibiotic
N. Palanisamy, A. Degen, A. Morath, C. Juraske, M. A. Öztürk, W. W. Schamel and B. Di Ventura
Nature Communications 2019
doi:10.1038/s41467-019-12911-1


Optogenetic Repressors of Gene Expression in Yeasts Using Light-Controlled Nuclear Localization
S. H. Geller, E. B. Antwi, B. Di Ventura and M. N. McClean
Cellular and Molecular Bioengineering 2019
doi:10.1007/s12195-019-00598-9


Context-dependent activity of A domains in the tyrocidine synthetase
A. Degen, F. Mayerthaler, H. D. Mootz and B. Di Ventura
Scientific Reports 2019
doi:10.1038/s41598-019-41492-8


Switchable inteins for conditional protein splicing 
B. Di Ventura and H.D. Mootz
Biol Chem. 2019
doi:10.1515/hsz-2018-0309


Optogenetic Control of Nuclear Protein Import in Living Cells Using Light-Inducible Nuclear Localization Signals (LINuS)
P. Wehler, D. Niopek, R. Eils and B. Di Ventura
Curr Protoc Chem Biol, 2016
doi:10.1002/cpch.4


Optogenetic control of nuclear protein export
D. Niopek, P. Wehler, J. Roensch, R. Eils and B. Di Ventura
Nat Commun, 2016
doi:10.1038/ncomms10624


Go in! Go out! Inducible control of nuclear localization
B. Di Ventura and B. Kuhlman
Curr Opin Chem Biol, 2016
doi:10.1016/j.cbpa.2016.06.009


Backbone circularization of Bacillus subtilis family 11 xylanase increases its thermostability and its resistance against aggregation
M. C. Waldhauer, S. N. Schmitz, C. Ahlmann-Eltze, J. G. Gleixner, C. C. Schmelas, A. G. Huhn, C. Bunne, M. Buscher, M. Horn, N. Klughammer,J. Kreft, E. Schafer, P. A. Bayer, S. G. Kramer, J. Neugebauer, P. Wehler, M. P. Mayer, R. Eils and B. Di Ventura
Mol Biosyst, 2015
doi:10.1039/c5mb00341e


Engineering light-inducible nuclear localization signals for precise spatiotemporal control of protein dynamics in living cells
D. Niopek, D. Benzinger, J. Roensch, T. Draebing, P. Wehler, R. Eils and B. Di Ventura
Nat Commun, 2014
doi:10.1038/ncomms5404


Creating functional engineered variants of the single-module non-ribosomal peptide synthetase IndC by T domain exchange
R. Beer, K. Herbst, N. Ignatiadis, I. Kats, L. Adlung, H. Meyer, D. Niopek, T. Christiansen, F. Georgi, N. Kurzawa, J. Meichsner, S. Rabe, A. Riedel, J. Sachs, J. Schessner, F. Schmidt, P. Walch, K. Niopek, T. Heinemann, R. Eils and B. Di Ventura
Mol Biosyst, 2014
doi:10.1039/c3mb70594c


Chromosome segregation by the Escherichia coli Min system
B. Di Ventura, B. Knecht, H. Andreas, W. J. Godinez, M. Fritsche, K. Rohr, W. Nickel, D. W. Heermann and V. Sourjik
Mol Syst Biol, 2013
doi:10.1038/msb.2013.44


Self-organized partitioning of dynamically localized proteins in bacterial cell division
B. Di Ventura and V. Sourjik
Mol Syst Biol, 2011
doi:10.1038/msb.2010.111


Reconstitution of Mdm2-dependent post-translational modifications of p53 in yeast
B. Di Ventura, C. Funaya, C. Antony, M. Knop and L. Serrano
PLoS One, 2008
doi:10.1371/journal.pone.0001507


From in vivo to in silico biology and back
B. Di Ventura, C. Lemerle, K. Michalodimitrakis and L. Serrano
Nature,2006
doi:10.1038/nature05127


Space as the final frontier in stochastic simulations of biological systems
C. Lemerle, B. Di Ventura and L. Serrano
FEBS Lett, 2005
doi:10.1016/j.febslet.2005.02.009


SmartCell,a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks
M. Ander, P. Beltrao, B. Di Ventura, J. Ferkinghoff-Borg, M. Foglierini,A. Kaplan, C. Lemerle, I. Tomas-Oliveira and L. Serrano
Syst Biol (Stevenage), 2004